Descriptors of ST-scales for 20 coded amino acids. |
AA |
Abbr. |
ST1 a |
ST2 |
ST3 |
ST4 |
ST5 |
ST6 |
ST7 |
ST8 |
Ala |
A |
-1.552 |
-0.791 |
-0.627 |
0.237 |
-0.461 |
-2.229 |
0.283 |
1.221 |
Arg |
R |
-0.059 |
0.731 |
-0.013 |
-0.096 |
-0.253 |
0.300 |
1.256 |
0.854 |
Asn |
N |
-0.888 |
-0.057 |
-0.651 |
-0.214 |
0.917 |
0.164 |
-0.140 |
-0.166 |
Asp |
D |
-0.907 |
-0.054 |
-0.781 |
-0.248 |
1.120 |
0.101 |
-0.245 |
-0.075 |
Cys |
C |
-1.276 |
-0.401 |
0.134 |
0.859 |
-0.196 |
-0.720 |
0.639 |
-0.857 |
Gln |
Q |
-0.622 |
0.228 |
-0.193 |
-0.105 |
0.418 |
0.474 |
0.172 |
0.408 |
Glu |
E |
-0.629 |
0.390 |
-0.380 |
-0.366 |
0.635 |
0.514 |
0.175 |
0.367 |
Gly |
G |
-1.844 |
-0.018 |
-0.184 |
0.573 |
-0.728 |
-3.317 |
0.166 |
2.522 |
His |
H |
-0.225 |
0.361 |
0.079 |
-1.037 |
0.568 |
0.273 |
1.208 |
-0.001 |
Ile |
I |
-0.785 |
-1.010 |
-0.349 |
-0.097 |
-0.402 |
1.091 |
-0.139 |
-0.764 |
Leu |
L |
-0.826 |
-0.379 |
0.038 |
-0.059 |
-0.625 |
1.025 |
-0.229 |
-0.129 |
Lys |
K |
-0.504 |
0.245 |
0.297 |
-0.065 |
-0.387 |
1.011 |
0.525 |
0.553 |
Met |
M |
-0.693 |
0.498 |
0.658 |
0.457 |
-0.231 |
1.064 |
0.248 |
-0.778 |
Phe |
F |
-0.019 |
0.024 |
1.080 |
-0.220 |
-0.937 |
0.570 |
-0.357 |
0.278 |
Pro |
P |
-1.049 |
-0.407 |
-0.067 |
-0.066 |
-0.813 |
-0.890 |
0.021 |
-0.894 |
Ser |
S |
-1.343 |
-0.311 |
-0.917 |
-0.049 |
0.549 |
-1.533 |
0.166 |
0.280 |
Thr |
T |
-1.061 |
-0.928 |
-0.911 |
-0.063 |
0.538 |
-0.775 |
-0.147 |
-0.717 |
Trp |
W |
0.853 |
0.039 |
0.260 |
-1.163 |
0.160 |
-0.202 |
1.010 |
0.195 |
Tyr |
Y |
0.308 |
0.569 |
1.100 |
-0.464 |
-0.144 |
-0.354 |
-1.099 |
0.162 |
Val |
V |
-1.133 |
-0.893 |
-0.325 |
0.303 |
-0.561 |
-0.175 |
-0.020 |
-0.311 |
a The 8 principal component scores of ST-scales are derived from 827 structural variables of 167 amino acids by PCA. |
References |
[1] L. Yang, M. Shu, K. W. Ma, H. Mei, Y. J. Jiang, Z. L. Li, ST-scale as a novel amino acid descriptor and its application in QSAM of peptides and analogues, Amino Acids, 38 (2010) 805-816. |
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